Bharat

A way to calculate coverage breadth

2

It is often useful to see if reads horizontally cover a certain percentage of a locus' length. Existing tools (bedtools coverage) are too slow/memory-consuming with unsorted BAMs.

I have found ADOPT quite useful so far. I wanted to ask if you plan to release an update. For example sequences trained using ESM2 or ESM3 embeddings? If not...