Bastian Kalcher

Results 4 comments of Bastian Kalcher

Hi yogesh-dhande, I also had problems with the RAM. After I increased the value of the following variable from 4 to 10, the calculation worked for me. https://github.com/deepmind/alphafold/blob/624a44966619218f546852863f0f9220fc9c2849/docker/run_docker.py#L247 From the...

hello ericmjl I had a similar idea and wanted to increase the number of CPUs. Unfortunately the adjustment of the variable `n_cpus` has no effect on the command that is...

I had the same problem. I increased the value of the following line from 4 to 10. This allows to use 10 times as much RAM as the GPU has...

I had the same problem with AlphaFold version v2.2.2 and Jax version 0.3.14 This solved my Problem https://github.com/steineggerlab/alphafold/commit/bd696aaa91480a2d4af9a50592471276abcb1987 I think I had to rebuild the Docker image before the bugfix...