Antoine Houtain

Hello, I had a similar issue, after looking at the code, the database is actually written somewhere in the miniconda environment. In my case it was written at: /home/user/env/blobtools/lib/python3.6/site-packages/data/nodesDB.txt Maybe...

Hello, I have the same issue with ONT long reads... I overlap with minimap2: `minimap2 -x map-ont -t 44 genome.fa reads.fq > genVont.paf` Then I try Racon 1.3.1 (downloaded with...

Hello, I run locally on a desktop machine without slurm. I could not find duplicated identifiers in reads nor in contigs, here are example IDs: Ctgs: ``` >scf7180000001958 >scf7180000001959 >scf7180000001960...

I will have to ask permission, this may take time. If I get it, I will comment on this issue, for the time being, I will try to reformat reads...