Annie-GW

Hi Chris, Thank you but the final data.json file is actually empty. We are not sure what is going on. Do you spot any mistakes in the command? Kind regards,...

Hi Chris, We have re-run the analysis following the command posted previously. We can obtain the eventalign.index file (51.7Mb) and this is the message that we get : xx/envs/xpore/lib/python3.8/site-packages/xpore/scripts/dataprep.py:112: SettingWithCopyWarning:...

Thanks, Chris. We have re-run the analysis according to your suggestion. The resulting data.json file is only 235 kb containing 40+ genes! When we did the mapping to transcriptome, the...

Thanks, Yuk Kei. We have no problem mapping to transcriptome. It is the mapping to genome part that we are stuck.