AnnaClo

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Question about using flashweave with sequencing data of multiple organisms

Hi! I used Flashweave for multiple organisms as you indicated and it worked wonderfully. I still have one aspect that I want to ask about. I would like to include...

Question about using flashweave with sequencing data of multiple organisms

Hi, thank you! So if I understand well, I would input the ASV tavbles as normal (raw, which will undergo CLR normalization within flashweave) and the non-sequencing variables (which I...

Printing p values and fdr-adjusted p values (learn_network)

Hi, thank you! I see that it's indeed not possible to do the check I intended to. I've been pre-filtering ASV tables with different rarity thresholds (e.g. abundance < 0.01%...

Spieceasi Error in if (max < min) stop("Did you flip min and max?") : argument is of length zero

I tried again and it seems to work. I'm not sure why, if possible i'd like to keep this issue open for a while more, because i need to use...

Spieceasi Error in if (max < min) stop("Did you flip min and max?") : argument is of length zero

With the data I'm using right now I see no error anymore, but in the coming days I'll work with another dataset, if I encounter the issue surely I can...