Andy-B-123

Hi, I would second this request! The program and documentation look excellent and would be very useful for a well documented organism I am working with. Some functionality to build...

Oooh I would be very interested in your results @sam217pa! And just a note, thank you @RemiAllio for this program, loving the versatility and annotation output of MitoFinder and working...

Thank you for the reply! Yes, essentially it would be the reverse of expanding MNPs. How does BCFtools flag or report MNPs as separate records? I can't seem to find...

Very excited for this!!!

Hi, maybe this helps but from what I can tell when vg giraffe hits these errors when accessing the same index files?  My situation was that I have a single...

> @Andy-B-123 I am facing exactly same question as you described. Do you use cluster job manage tool like slurm to run it in parallel? And I think the reason...

Hi, maybe this helps but from what I can tell when vg giraffe hits these errors when accessing the same index files?  My situation was that I have a single...

Fascinating, glad to hear I'm not the only one! Feels like something is slightly off in how mutliple vg instances interact with the index files? Copying works for me as...

Hi, mentioning in case someone comes across this. I had this same error happen and found out it was a mis-match between the alignment fasta headers and the fasta I...