Amanda Kedaigle

icon indicating a website link http://amandakedaigle.com icon indicating an email [email protected]

icon company Broad Institute icon location United States icon location Computational biologist in biotech. Formerly Levin & Arlotta labs at Broad Institute/Harvard, and @fraenkel-lab at MIT

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getCounts with 10X Cellranger output

As an update, I've tried a couple different ways to get around this (both reading out my bam file as a sam and changing each CB tag to an RG...