Alteroldis

Please, update vectorclass library in package, because internal version don`t support compilation with CPU architecture-oriented optimization flags "march=native mtune=native".

Base errors looks like this: > ERROR: 1 funcAbort() ERROR: 2 () ERROR: 3 Node::calcHeight(Node*) ERROR: 4 Node::longestPath2(Node*&, Node*&) ERROR: 5 PhyloTree::convertToRooted() ERROR: 6 ModelMarkov::setReversible(bool, bool) ERROR: 7 ModelMarkov::ModelMarkov(PhyloTree*, bool,...

Q: Detection SV by aligning to diploid (not haplotype resolved) genome

2

Hi Dr Jiang. I work with species, genome of which has a high number of genome rearrangements. Because of that I can assembly only diploid version of genome with Flye....

Assembly of complex genomes with high rate of genome rearrangements

1

Dear Dr Kolmogorov, I work with very strange genome of sea cucumber and could not get a mosaic haploid genome assembly. I tried some options (meta, keep-haplotypes, no-alt-contigs, tweaks from...

Incomplete prunning

1

Hi Dr. Zhang, At first, you create elegant tool. But with my species I be faced with incomplete prunning. My allele.ctg.table include many contigs which incorporated in same group and...

Dear Dr Chen. I work with species, genome of which has a high number of genome rearrangements. Because of that I can assembly only diploid version of genome with Flye....