Alina-Ba

In theory maybe. But I have a quite strong change in one of my cell types and it is not detected as credible (I assume due to the small sample...

Thanks a lot for your response @johannesostner Could you maybe specify how you would suggest including a subject-specific random intercept? Do you have any other suggestions for changes in variables,...

Thanks @mschilli87!! I tried it and indeed I get an effect - at least for a FDR of 0.2! @johannesostner were you suggesting something like this: `mod.CompositionalAnalysis(data_all, formula="Condition + Donor",reference_cell_type="Pericytes")`...