Alasdair Gray

Results 53 issues of Alasdair Gray

The new type [SequenceRange](http://bio.sdo-bioschemas-227516.appspot.com/SequenceRange) needs a descriptive definition.

type: SequenceRange

Discussion from [Community Call on 24 May](https://docs.google.com/document/d/1kd5F97ogdiPNhLTnkei-RVR8TC8Ohpc5QSPX3KsfDrk/edit#heading=h.5resupdh3177): - Alan looked at live deploys, numerous incorrect ([analysis document](https://docs.google.com/document/d/1_UpLfoE38bu9NxHJ57twZcvUbEX7cnpZ6EnpEMVwc-I/edit?usp=sharing)) - Valid / wrong, no distinction on website - List is manual -...

Validation

New type approach is looking promising. the screenshot below is made from a slightly modified version of the JSON-LD representation grabbed from the view-source of a type on the schema.org...

topic: specification
website
Enhancement

The BioSample profile already includes `isEncodedByBioChemEntity` for a protein sample that can then point to a Gene. The inverse should also be included.

type: BioSample

The following proposal for a BioSample profile was made at the [8 May 2019 F2F meeting](https://docs.google.com/document/d/1k5SVKreKbcuAzZ_Hp5YkMN6S1F2ROMHbjXNpdD5G4io/edit#heading=h.yqhzs8hxknqp). **Required** - Identifier - name - description **Recommended** **Optional** - collector [the person or...

type: BioSample

The data dump includes multiple instances where the prefix `schema` is used instead of `sc`. These result in the corresponding data being generated with the incorrect IRI for two types....

Live Deploy

When a HTTP 406 error is generated, the resource URL that generated the error is not included in the error message. For example, the following is one that I received:...

good first issue

When `@base` is set in the `.json` metadata file, you cannot use a local `table.json` file since csv2rdf attempts to resolve the location of the `tableSchema` property based on the...

good first issue