Ahahaha3

ERROR: this implementation supports no more than 268435456 reads

2

I used HIFI and HIC data to assembly a genome(~3Gb), command: hifiasm -o Y_asm -t 70 --h1 ../HIC/*_1.fq.gz --h2 ../HIC/*_2.fq.gz ../01.ccs/HiFireads/*.subreads.fastq.gz. But i can't understand what is causing this error.

Died at partition.pl line 59

3

hi, when i run 'partition.pl -g Allele.gene.table -r draft.asm.fasta -b sample.clean.bam -d wrk_dir', the error is:Died at /data/software/ALLHiC/scripts/partition.pl line 59. Why is that？

Different versions of vg produce different GAM and VCF files when mapping with vg giraffe and calling variants

1

**PLEASE DO NOT MAKE SUPPORT REQUESTS HERE** Please the Biostars forum instead: https://www.biostars.org/new/post/?tag_val=vg Hi, i used the vg=1.35 and vg=1.38 to giraffe for same fastq file, but i got different...

**1. What were you trying to do?** ``` vg ids -j Chr08.vg ``` **2. What did you want to happen?** run vg ids -j Chr08.vg **3. What actually happened?** [E::bgzf_read_block]...