ANTsPy
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ANTsX
Fast and comprehensive medical imaging analysis framework in Python
Dear devs, I am trying to align two 3D images using ANTsPy in a low spec machine. By just running the default code: `fi = ants.image_read(file1)` `mi = ants.image_read(file2)` `mytx...
**Describe the bug** I use "pip install antspyx" to install antspyx but it gives an error while building Cmake files. **To Reproduce** Steps to reproduce the behavior: 1. Open a...
Hi there, I want to know whether it's possible that I only conduct ants.registration to get the deformable field, skipping the rigid/affine registration step. Do we have one "typeofTransform" for...
Could you clarify whether the input and output spaces for `ANTsTransform.apply_to_point` are index or physical? I couldn't find anything about this in the documentation for ANTsPy or ANTs
`ants.transform_index_to_physical_point` and `ants.transform_physical_point_to_index` are not present in the published antspy documentation. I was not aware of these extremely useful methods until I happened upon #159
Thoughts on creating the aliases `read_image` and `write_image` for `image_read` and `image_write` respectively? I find myself accidentally using `read_image` all of the time, and it feels like the more pythonic...
Readability could be improved by conforming to PEP-8. Very easy to do with a formatter such as [black](https://github.com/psf/black) before commiting and also as a build step in github's CI tool.
I want to move to ANTsPy. Could you please help me in rewriting this code in antspy? Do I need to do multiple ants.registrations? Also how do I define -c,-s,-f,metricWeight,radius,samplingStrategy,...
Trying to install ANTsPyx on my mac machine (Catalina, 10.15.7). "pip install ANTsPyx" didn't work so I tried installing from the source code (with these commands: git clone https://github.com/ANTsX/ANTsPy.git cd...
antspy 0.2.7 There are a couple wacky things going on with `ants.read_transform`. For one, the `dimension` kwarg is ignored, as `dimension` is reassigned on line 293. Should make another issue...