FAST-Pathology

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Pathologist claims the class labels are incorrect in UI

5

Benign is In situ and In situ should be benign Normal is invasive and invasive should be normal I requested for a WSI where Pathologist has good confidence and showed...

lomshabhishek

Is there a docker image or dockerfile that can be used to setup FAST-Pathology

2

Facing issues while installing in Docker env Docker image or file could come in handy

lomshabhishek

Viewport only takes a quarter of the available space in MacOS

3

When opening an image in FastPathology in MacOS, the image is only visible in a quarter of the usual space:  When zooming on the tissue, it zooms on the...

cavenel

color issue on segmentations when running multiple models

2

When running tissue segmentation (red) followed by nuclei segmentation (green) the segmentation color for the nuclei segmentation changes from green to red after inference. If I change the color of...

mhoibo

File names ending with space

5

Using this artifact https://github.com/AICAN-Research/FAST-Pathology/actions/runs/4808864433. There is an issue with the files having a filename ending with a space such as "something .vsi". When saving the results of the models, the...

SoroushOskouei

Probably missing dependencies. We need to start bundling these.

smistad

I have integrated a classification model in FAST Pathology, and noticed two potential additions to the "Display" view: - Would it be possible to add numerical values to the sliders,...

MarkusDrange

andreped

andreped

Just tried to import model trough the gui, the pipeline works fine, but was not able to upload the model as a folder.

mhoibo