transcriptome topic

Genome Annotation Without Nightmares

enormandeau

Evolutionary Transcriptomics with R

drostlab

TreeExp 2.0: Toolbox for analyzing expression evolution based on RNA-seq count data

hr1912

A Python library to visualize and analyze long-read transcriptomes

mortazavilab

Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

comprna

Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer

hyeshik

de novo assembly of RNA-seq data using ABySS

bcgsc

UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets

nf-core

pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data

federicomarini

A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes

cfarkas