snp-data topic

List snp-data repositories

bigsnpr

184
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44
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R package for the analysis of massive SNP arrays.

strataG

25
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11
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strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.

SNPbinner

32
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20
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SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.

sequoia

25
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6
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R package for pedigree inference based on SNP data

ECOGEMS

15
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1
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Efficient compression and retrieve of genotype data with integer sparse matrices