polyploid topic
List
polyploid repositories
allhic
57
Stars
12
Forks
Watchers
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
mcscan
21
Stars
13
Forks
Watchers
Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format
vcf2phylip
265
Stars
83
Forks
Watchers
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
nPhase
40
Stars
4
Forks
Watchers
Ploidy agnostic phasing pipeline and algorithm
MAPpoly
23
Stars
9
Forks
Watchers
Genetic maps in autopolyploids