phylogenetic-trees topic
graphlan
High-quality circular representations of taxonomic and phylogenetic trees
TreeDist
Calculate distances between phylogenetic trees in R
genesis
A library for working with phylogenetic and population genetic data.
pyCirclize
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
BuscoOrthoPhylo
Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs
CafePlotter
A tool for plotting CAFE5 gene family expansion/contraction result
r_phylogenetics_worshop
Using ggtree to build phylogenetic trees
TreeTools
Create, modify and analyse phylogenetic trees in R
diff-evol-tree-search
We introduce a differentiable approach to phylogenetic tree construction, optimizing tree and ancestral sequences in its original representation itself, thus requiring no prior training data.
phyTreeViz
Simple phylogenetic tree visualization python package for phylogenetic analysis