phylogenetic-trees topic
archaeopteryx-js
Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.
forester
forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research
PhyloTrees.jl
Phylogenetic trees in Julia
ghost-tree
creating hybrid-gene phylogenetic trees for diversity analyses
rtrees
rtrees: an R package to assemble phylogenetic trees from mega-trees
get_phylomarkers
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
phyd3
Phylogenetic tree viewer based on D3.js
iroki
Super snazzy online phylogenetic tree viewer with automatic customization using simple, tab-separated text files.
itolapi
Python API for the Interactive Tree of Life (iTOL)