orthology-inference topic

Genome wide orthology inference and dNdS estimation

drostlab

A high performance tool to identify orthologs and paralogs across genomes.

Rinoahu

Taxon-aware analysis of clustered protein sequences

DRL

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

datasnakes

a broadly applicable tool for automated gene identification and retrieval

JLSteenwyk

a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees

JLSteenwyk

Protein orthologous group assignment with deep learning

univieCUBE