molecular-modeling topic

List molecular-modeling repositories

ANI1_dataset

93
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18
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A data set of 20 million calculated off-equilibrium conformations for organic molecules

aimnet

86
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25
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Atoms In Molecules Neural Network Potential

Uni-Mol

568
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105
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Official Repository for the Uni-Mol Series Methods

pteros

35
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8
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Modern and fast molecular analysis and modeling library for C++ and Python

Transformer-M

198
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23
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[ICLR 2023] One Transformer Can Understand Both 2D & 3D Molecular Data (official implementation)

tinker9

48
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25
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Tinker9: Next Generation of Tinker with GPU Support

DockingPie

62
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12
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A Consensus Docking Plugin for PyMOL

stk-vis

32
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4
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A cross-platform application for visualization of molecular databases.

NNPOps

79
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16
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High-performance operations for neural network potentials