batch-correction topic

Reference mapping for single-cell genomics

theislab

R package for the joint analysis of multiple single-cell RNA-seq datasets

kharchenkolab

Harmony framework for connecting scRNA-seq data from discrete time points

dpeerlab

Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:

sdomanskyi

Mixed-effect model to test differences in cell type proportions from single-cell data, in R

MangiolaLaboratory

Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)

quadbio