Sander de Backer
Sander de Backer
v2.23 works, current version gives this error
More information about the commands you used to download the database would be useful.
> This does not work - since it reports some sequences for which it cannot extract taxonomy. Does it kill the process (error), or is this simply a warning?
> Hello, I am having the same issue. I had to manually download the libraries from https://benlangmead.github.io/aws-indexes/k2 because the cluster I'm working on does not allow ftp downloads. When I...
Encountered the same errors with: R version 4.1.1 shiny version 1.7.1 pavian v1.0 Any progress on these errors?
Your dataset contains SNP data, which is DNA. IQ-Tree states "Alignment most likely contains protein sequences". The autodetect doesn't recognize your input as DNA and therefore gives an error about...
Hi sekhwal, Your IQ-Tree log states "Alignment has 480 sequences with 4913018 columns" meaning your alignment contains sequences of almost 5 million nucleotides. Combined with a large sample set of...
Three years later and this seems still not implemented. It would be an extremely useful feature! Please consider adding this :-)
Hi all, Recently experienced the same error (no taxo.k2d file). However, every time this error was the result of specifying the wrong directory of the database with the "--db" argument....
Responding my findings here because I myself was looking for an answer to a similar problem. Hopefully this is useful for other users. I've found this in another thread: >...