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VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number variants (CNVs) from targeted next-generation sequencing data. Fo...

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The function for reading the bedfile searches through the bed directory and all its subdirectories. Multiple bed files might be read into the list.

Default paths are hard-coded. While these are overwritten by command line arguments or a winDialog() call, a separate configuration file would be a better approach.