petermr

RS had changed and I had zero captures. Revisit in the morning.

Material taken from https://github.com/petermr/tigr2ess/blob/master/dictionaries/TUTORIAL.md This tutorial was for food crops but should translate to other topics

# strategy Dictionary strategy from: https://github.com/petermr/tigr2ess/blob/master/dictionaries/TUTORIAL.md ## example for plants ``` ami-dictionary create --informat wikipage --input https://en.wikipedia.org/wiki/Ocimum_tenuiflorum --dictionary otenuiflorum --directory mydictionaries --outformats xml,html ``` # wikipedia page ## sars_covid_2 https://en.wikipedia.org/wiki/Severe_acute_respiratory_syndrome_coronavirus_2...

If the articles are in an Open repository then getpapers should be able to help. If they are in a closed publication site then the articles may be behind a...

Ran query immediately afterwards on EPMC. Got expected output. ``` Preprints (1,150) Books & documents (1) Date 2024 (924) 2023 (4,194) 2022 (3,963) [China's wetland soil organic carbon pool: New...

Reran on local commandline without problems: ``` pm286macbook-2:~ pm286$ pygetpapers -q "carbon emissions" -k 10 -o junk -p /opt/anaconda3/lib/python3.8/site-packages/requests/__init__.py:87: RequestsDependencyWarning: urllib3 (2.2.1) or chardet (5.2.0) doesn't match a supported version!...

Reran the Colab notebook which worked satisfactorily , so this may be a transient problem. ``` ### **Step 4: Downloading pdf only for 10 papers on the query.** * **-k**...

This is generated because `RESPONSE_WRAPPER` is missing/None. If `get(RESPONSE_WRAPPER)` is used it would return `None` and this could be tested rather than trapping the exception. I hope that this is...

I have now cloned `sknw` and the `setup.py` indicates it has an earlier version number ``` pm286macbook:workspace pm286$ git clone https://github.com/Image-Py/sknw.git Cloning into 'sknw'... remote: Enumerating objects: 80, done. remote:...

Which version should I use? V0.14 is the installed version but v0.13 appears more recent Should the checkout have V0.15