petermr

This is a bug. Can you open the file in a text editor (not word). If there is an element delete it and redisplay. I will try to fix in...

OK - this is either a bug or you don't have any hits! Can you install `tree` (it's a UNIX tool that lists directories to the console) Then we can...

Well done so far. There is no inbuilt dictionary for "viruses" - it will have to be created. However we have a (small) test dictionary . Try ``` ami -p...

Thank you, This is an excellent bug report. It looks as if your tree has no data in before you started . Here is mine: ├── PMC6808808 │ ├── eupmc_result.json...

Thanks Vaishali, this makes sense: (HINT - no need to post the whole output, just enough to show the general problems): ``` Well, I got this (on using the UNIX...

`ami-dictionary` has been discontinued. See the FAQ. I'm trying to solve the `input/>` problem.

`AMI.execute(class, cmd) is used to extract the abstractTool and read the options summary. ## successful example `org.contentmine.ami.tools.AMIFilterTest.testFallback()`, creates a testable Options value output: ``` @Test public void testFallback() { AMIFilterTool...

On Mon, May 25, 2020 at 11:59 AM Remko Popma wrote: > Fixed in ami3 master. > > FYI: You may be interested in > https://stefanbirkner.github.io/system-rules/#SystemErrAndOutRule > for asserting on...

# environment operating system, RAM, # attempted operation Installing `Node.js` for `getpapers`. Following instructions from ??? # output so far ## step 1 ... did it work? ## step 2...

Well done Kareena. You have reported this well. (It's also useful to clip the output as text as well as an image so we can cut and paste). It's almost...