Lily Wang

Add documentation on CI/CD

4

**Is your feature request related to a problem? Please describe.** We should document our CI, which is quite complicated. This will help people who are new to development (e.g. MDAkits)...

Update FAQ

5

If you have encountered any problems while working with MDAnalysis, and you do not see the problem and solution on the MDAnalysis FAQ (https://userguide.mdanalysis.org/stable/faq.html), please help us update our documentation...

Update supported TPR versions

3

This table is out of date: https://userguide.mdanalysis.org/stable/formats/reference/tpr.html#supported-versions A fix should: check the MDAnalysis class for currently supported versions, and update the table

Python >= 3.6 Numpy >= 1.16.0 rdkit >= 2020.03.1 Others....

Update TPRParser to include keyword `tpr_resid_from_one` and index from 1

1

* Remove note in tpr.rst

Pickling

1

Add a pickling section. Universe, Readers can get pickled.

Diffing will be easier if we can just keep the notebook input. I'm not entirely sure how to do this with nglview, but maybe selenium will save us all. Something...

New function/property for internal connections

Maybe we can adapt @jbarnoud's?

Add this to the transformation page, probably the notebook too