Jonas Fuchs

icon indicating a website link https://www.uniklinik-freiburg.de/virologie/sektion-klinische-virusgenomik.html

icon company Institute of Virology, Freiburg University Medical Center, Faculty of Medicine, University of Freiburg icon location Molecular virologist by training. Developing software for viral genomics.

Results 3 comments of Jonas Fuchs
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Run BAMdash on multiple reference contigs

So far you can only create one plot per reference. But I already had something like this in mind. Not that easy to get right with plotly, though.

human whole genome

Hi thanks! You have to only specify the reference id. So you should be able to display a whole chromosomes although I have never tried. But specify the `--binsize` argument...

Let users provide partial schemes to fill with varvamp

Jup, good further advancment. But likely not so super straight forward to implement. Somehow we would need to check how good the qPCR probe or flanking primers actually fit to...