GenoStack

Can cromwell trigger workflow status change event?

1

Cromwell has REST api to query the workflow status,'RUNNING','Aborted' etc. Does Cromwell has any event system to subscribe these events? With these events, outside apps can monitor the workflow in...

jellyfish error when build database

3

when build databases jellyfish error on the first step and no other details . Found jellyfish v1.1.12 Kraken build set to minimize disk writes. Found 12 sequence files (*.{fna,fa,ffn,fasta,fsa}) in...

lmerge divide zero error

2

we have 1000 samples and when lmerge after lsort, lmerge:213 report divide zero error. some debug info: combine_pdfs(BP, c ,use_product, weighting_scheme)  a_L[0] p_L[0] on lmerge：128  miss=1 on lmerge:181...

when merge sample vcfs ,lmerge use "sum" and "prod" options to select merge algorithm.What is the difference between them?