MIScnn

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Bug in split_validation

1

There is a bug in `split_validation()`: At this [line](https://github.com/frankkramer-lab/MIScnn/blob/master/miscnn/evaluation/split_validation.py#L73), we create `cb_list` based on `save_models` but we never pass it to `model.evaluate()`. This means that your model will never be...

emmanuel-nwogu

ajinkya-kulkarni

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.7.0 to 2.11.1. Release notes Sourced from tensorflow's releases. TensorFlow 2.11.1 Release 2.11.1 Note: TensorFlow 2.10 was the last TensorFlow release that supported GPU on native-Windows. Starting...

dependabot[bot]

How do we create a data interface without segmentations for prediction only? [Help Wanted]

1

Hi all, I tried to create a Data_IO without segmentations.nii.gz and only the imaging data, but it fails when the file is not present. I trained the model already, it's...

joaomamede

Bumps [pillow](https://github.com/python-pillow/Pillow) from 8.3.2 to 9.3.0. Release notes Sourced from pillow's releases. 9.3.0 https://pillow.readthedocs.io/en/stable/releasenotes/9.3.0.html Changes Initialize libtiff buffer when saving #6699 [@​radarhere] Limit SAMPLESPERPIXEL to avoid runtime DOS #6700 [@​wiredfool]...

dependabot[bot]

got error while installing in kaggel notebook

1

error: subprocess-exited-with-error × python setup.py egg_info did not run successfully. │ exit code: 1 ╰─> [39 lines of output] Traceback (most recent call last): File "/opt/conda/lib/python3.10/site-packages/setuptools/_vendor/packaging/requirements.py", line 35, in __init__...

rddvsr

Hi,I'm testing MIScnn for IF data (grayscale input) and the segmentation has 3 labels (background =0,1,2). I'm having an error when running ``` model = Neural_Network(preprocessor=pp, loss=tversky_loss, metrics=[dice_soft, dice_crossentropy], batch_queue_size=3,...

joaomamede