Boas Pucker
Boas Pucker
AppliedGenomeResearch
course about NGS data processing: genomics and transcriptomics
MGSE
Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.
RNA-Seq_analysis
scripts for RNA-Seq analysis
teaching
This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
MolecularMethodsInGenomeResearch
practical course about lab methods in genome research
MYB_annotator
This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new transcriptome of genome assemblies.
FlavonoidFriday
Flavonoids are specialized metabolites in plants that have numerous functions including protection against abiotic stresses, pigmentation, and repelling herbivores.This repository provides additional...
KIPEs
Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new transcriptome of genome sequence assembly.