Big Data Genomics

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Results 8 repositories owned by Big Data Genomics

adam

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ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

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mango

121
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A scalable genome browser. Apache 2 licensed.

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avocado

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A Variant Caller, Distributed. Apache 2 licensed.

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bdg-formats

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Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.

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cannoli

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Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.

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eggo

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Ready-to-go Parquet-formatted public 'omics datasets

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rice

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An RNA pipeline built on top of ADAM. Apache 2 licensed.

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utils

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General utility code used across BDG products. Apache 2 licensed.

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