Shreyas Fadnavis
Shreyas Fadnavis
Hi @josephmje and @oesteban ! I only saw this now :) I am happy to help with `Patch2Self` if this is still of interest! Also nothing *magical* in Patch2Self really......
Hi @alex-reardon -- quick question: do you have AP-PA data? What distortion correction option from QSIPrep are you using? If using SyN to do SDC, I don't think the Phase...
Hi @WilliamFCB ! Is this striped pattern consistent across all gradient directions? Or just a few of them? If inconsistent, you can try using '--denoise_method patch2self'-- it should help get...
Any other suggestions anyone? @arokem @skoudoro @RafaelNH @Garyfallidis ?
Hi @skoudoro -- thanks for reporting this! Can you tell the system on which these times were computed on?
Hi @m13slash9 -- Thanks for pointing this out, I had not thought of this edge case! Your solution : `diff_denoised_data = patch2self(np.concatenate((diff_data,diff_data,diff_data),2), gradient_table.bvals, model='ols', shift_intensity=True, clip_negative_vals=False, b0_threshold=25)` should work as...
Hi @karanphil -- Same, I have never had memory issues either :) Can you report the version of CVXPY that you are working with? Maybe this is something we need...
@karanphil thanks! -- @skoudoro, I know that `CVXPY` is an optional dependency, but is there a way to enforce a version on an optional dependency?
@jhlegarreta +1 for relocating!! Any ideas on where this should go? @arokem @Garyfallidis @skoudoro would `sims` be a good idea?
@araikes -- This is very interesting (at least to me)! Can you share some before after pictures so that we get a better sense of what's happening? Using Patch2Self there...