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methratio.py memory issue

Open Nitin123-4 opened this issue 1 year ago • 0 comments

I am running it in slurm with : srun --nodes=1 --cpus-per-task=20 --ntasks-per-node=1 --mem=30000M

methratio.py -I --np 10 --mem 5000 -o SampleName_methratio.txt -d $genome_fasta bam.bam > SampleName.bam_mr.log

but I am getting the error : Only 3158 MB available, not 5000

As i am blocking 30gb memory I am not expecting this memory issue. Please help with this.

Nitin123-4 avatar Feb 08 '23 22:02 Nitin123-4