segmenteverygrain
segmenteverygrain copied to clipboard
zsylvester
A SAM-based model for instance segmentation of images of grains
Hello, thanks for the repo! Any chance I can train/finetune the model without resorting to creating patches?
Nice to meet you. Thanks for such a great model. I am trying to run `Segment_every_grain.ipynb` on VScode. I rewrote part of the contents of the distributed `Segment_every_grain.ipynb` (see attached...
I get the following error code while using code in google collab: ValueError: You are trying to restore a checkpoint from a legacy Keras optimizer into a v2.11+ Optimizer, which...
May I ask that how the `gravel_example_mask.jpg` was generated? Thanks!
Block of code I am running into issue with: !wget "https://raw.githubusercontent.com/zsylvester/segmenteverygrain/main/segmenteverygrain/checkpoints/checkpoint" !wget "https://raw.githubusercontent.com/zsylvester/segmenteverygrain/main/segmenteverygrain/checkpoints/seg_model.data-00000-of-00001" !wget "https://raw.githubusercontent.com/zsylvester/segmenteverygrain/main/segmenteverygrain/checkpoints/seg_model.index" --2025-01-10 18:56:48-- https://raw.githubusercontent.com/zsylvester/segmenteverygrain/main/segmenteverygrain/checkpoints/checkpoint Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.109.133, 185.199.111.133, 185.199.108.133, ... Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.109.133|:443... connected....
Running through the notebook examples there are a lot of absolute paths hardcoded to your local machine for images and weights. Can you change those to relative paths so the...
Contains a new interactive interface (per #20), defined in a submodule that can be imported as segmenteverygrain.interactions. The base segmenteverygrain module is unchanged. The new submodule implements a `Grain` class...
This is so much fun to work with 🤓! I am running through the notebooks to [assess the functionality](https://github.com/openjournals/joss-reviews/issues/7953#issuecomment-2770653683) and cannot find the image for [cell 3 in this notebook](https://github.com/zsylvester/segmenteverygrain/blob/main/segmenteverygrain/Segment_every_grain_w_georeferencing.ipynb)....
Metadata
Owner
Metadata
A SAM-based model for instance segmentation of images of grains