Code For Testing

[rupalkapdi]

Thank you for sharing your code. I have trained the model and getting the .npz file which contains weights of the trained model. Can you share the code for testing the images? Thank you.

[PoonamZ]

@rupalkapdi have you saved the volume of predicted tumor results ? If yes, please can you share the code .

[rupalkapdi]

I have used the same code which is provide @ zsdonghao/u-net-brain-tumor

[PoonamZ]

ok thank you .

[denzilsaldanha]

How exactly how you used the code for testing purposes?

[dxs66]

@rupalkapdi The meaning you said is that when you had run the model.py,you can get the .npz files ？And can you tell me ,after running the model.py where the .npz files is .

[dxs66]

@rupalkapdi Can you give me the test.py and the test image? Thank you !

[rupalkapdi]

@dxs66 Yes i get the .npz file which is created in checkpoints folder.

[rupalkapdi]

@dxs66 I will upload this file within some days. Thank you.

[dxs66]

@rupalkapdi Hi, runpalkapdi. After I run the train.py, I just get the checkpoint folder. But there are no files in the folder? I just run the cold the same as zsdonghao/u-net-brain-tumor. My turn is that paper_data_with_valid.py , model.py ,train.py .

[PoonamZ]

@rupalkapdi can you please share the checkpoints for the necrotic, edema and enhanced.

thank you.

[rupalkapdi]

@PoonamZ As I need only for all. I have generated weights for all only. Thank you.

[PoonamZ]

ok Thank you.

[TigabuYaya]

Dear all, can you please share me the outputs u got. Everything u discused here.

[yaoyao14]

@rupalkapdi I just cannot get npz file from running model.py. Can you tell me the right way to run three py file?Thank you so much.

[rupalkapdi]

@yaoyao14 You have to run train.py file directly. You will get the npz file in checkpoint folder after one successful epoch training. Afterwards same npz file is updated on completion of each epoch.

[adarsheng1]

Hi rupalkapdi. How much time does it take to create the npz file for first time.

[rupalkapdi]

Hi rupalkapdi. How much time does it take to create the npz file for first time.

Running this code, on lower capacity GPU for 100 epochs takes around 7 days.

[cnuzh]

Thank you for sharing your code. I have trained the model and getting the .npz file which contains weights of the trained model. Can you share the code for testing the images? Thank you.

Hi,do you have the testing code,now?

[rupalkapdi]

Yes, I have developed from training code itself.

[cnuzh]

Yes, I have developed from training code itself.

could you share it with me？Many,thanks.

[adarsheng1]

Hi rupalkapdi

I am runnning my code since many days. Only 3 epochs are generated. I don't have GPU and I am using CPU for this code. I have 2.7 GHz CPU and 16 GB RAM. Is it possible with this configuration?

[rupalkapdi]

No, It will take too long to complete. We need GPU to run this code.

Thank you.

[rupalkapdi]

Yes, I have developed from training code itself.

could you share it with me？Many,thanks.

Can you share your id on which I send the code?

[BIGGERYI]

Hi rupalkapdi, I have trained the medel, could you share the testing code with me? Thank you.

[adarsheng1]

Hi rupalkapdi, What is the minimum GPU configuration required for this code.

[cnuzh]

Yes, I have developed from training code itself.

could you share it with me？Many,thanks.

Can you share your id on which I send the code? My email address is [email protected] thanks!

[rupalkapdi]

@adarsheng1 depends on the GPU configuration

[rupalkapdi]

@cnuzh Sent

[cnuzh]

@cnuzh Sent

Thanks！

[GYN199]

Hello, thank you very much for the code you Shared. Can you share the code for testing the images? Thank you very much.