Wouter Saelens

Hi @davisidarta and @haircell Could you try to install the devel version of dynwrap? `devtools::install_github("dynverse/dynwrap@devel")` This contains a hotfix that should fix this error.

Hi everyone This error message originated from an error within the wrappers of the TI methods. However, we captured these errors incorrectly, and because of that you got this strange...

Hi! Hmmm I wonder whether docker can mount the directories correctly. Can you try to do `dynwrap::test_docker_installation(detailed = TRUE)` and see whether everything runs fine? Thanks Wouter

Hmmm that's weird! You have the correct singularity version for sure. Could you try to run `singularity exec 'docker://dynverse/ti_slingshot:v1.0.3' echo hi` in the command line and see what that gives...

Alright, makes sense! If you run `singularity exec 'docker://dynverse/ti_slingshot:v1.0.3' echo hi` (as an example), singularity will store them inside `.singularity`. You can transfer these to the cluster and specify your...

Hi @shuang1330 Could you provide me with the output of `singularity version`? There might be something wrong on our end with the version checking.

https://github.com/dynverse/dynmethods/tree/scorpius_package is a first attempt at doing this. When a user runs `ti_scorpius`, it will give you a prompt asking whether you want to use the R wrapper or the...

> Wouter and I discussed this in person; it's a good idea to have dynmethods support a few methods out of the box without having to install docker, though I...

@rcannood You can find an example at https://github.com/dynverse/ti_scorpius/tree/package _definition.yml_ and _example.sh_ are symlinked. This seemed to me the cleanest way of putting these both in the root directory and the...

dyntoy is now in suggests, which cleans up the testing quite a bit! [https://github.com/dynverse/ti_scorpius/commit/0cc4d8a45a0e0671ab570974a40628de483221c6](https://github.com/dynverse/ti_scorpius/commit/0cc4d8a45a0e0671ab570974a40628de483221c6)