Zach McKenzie
Zach McKenzie
https://github.com/cortex-lab/sortingQuality Nick Steinmetz has done a version in matlab if you want to check that out here. You can always adapt this for your purposes.
https://docs.python.org/3/library/shutil.html#rmtree-example Docs for `shutil` say that for Windows files with readonly bit set can cause this error so to override you have to do this but it still might not...
I'm wondering if anyone has tested re-running their analyses. Spikeinterface (0.99.1 & 0.100.0dev--especially 0.100.0dev) have had some additions/fixes to make working on Windows better. It would be great to know...
Can you copy the exact error that is appearing below?
Thanks @LeMuellerGuy . Yeah I think the base issue affecting all sorters has been fixed. Would you be willing to test any other sorter so we can confirm this is...
@yger, I'm on windows currently so if you need me to run any tests for SC2 feel free to shoot me a slack (but I know Sam is doing dual-boot...
So on the first try it runs fine without a problem. ```python sorting = si.run_sorter('spykingcircus2', rec, remove_existing_folder=True, output_folder='test-yger', verbose=True) detect peaks using locally_exclusive with n_jobs = 8 and chunk_size =...
@GabrielGaugain, which version of spikeinterface are you using right now? @samuelgarcia and @yger have both done work on tdc2 and sc2 since this issue was first open. So if you...
Howdy Gabriel! So TDC2 and SC2 have a caching error that fails on Windows. I have opened the discussion here #2164. Could you post your specific error there. @samuelgarcia and...
@h21ak9 This is the repo just for Kilosort 1 . This is the repo for 2+ https://github.com/MouseLand/Kilosort That being said they removed the use of kcoords after Kilosort 1. There...