OntoProtein

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Hello, I have been looking at this repo for the last couple of days. I'm interested in graph knowledge generation from the go features. How did you manage to create...

Amels404

您好，请问您们预训练好的GO的embedding可以分享一下吗？

liutong19991016

Question: Is it possible get the embedding of the relations and entities separately using Ontoprotein ?

6

Hi, I am just curious is it possible to get the embedding of proteins and relations in https://www.zjukg.org/project/ProteinKG25/ separately using huggingface ontoprotein model ( https://huggingface.co/zjunlp/OntoProtein)? Let us say, Protein_1 Enables...

anonimoustt

Issues regarding the usage of the ProtBERT tokenizer on multi-fasta-files

3

While trying to tokenize sequences from a multi-fasta-list, the generated input using the prot-BERT tokenizer always generates the same numpy arrays, eventhough the initial sequences differ significantly. Anyone else ever...

QuadratJunges