Zhongqu Duan

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icon company Westlake University icon location Hangzhou icon location Research assistant in Westlake Laboratory/Westlake University, genomic analysis

Results 3 issues of Zhongqu Duan

Error in Multiple-Samples Calling

3 comment

Hello, I am using sniffles2 to call SVs from multiple samples with the command: `sniffles --input 462samples.snf.list.tsv --vcf 462samples.sniffle2.jointcall.vcf --threads 64` However, it fails with the error message: > ..........

Multiple records in the same position

1 comment

Hi, I am using svim-asm to identify the SVs from haplotype-resovled human genomes. However, there are multiple records in the same position, with same length and genotype, a case showed...

readSVvcf is not work in findDups.R

4 comment

Hello, I want to construct the SV graph from several assemblies. Before starting my own works, I am testing the pipeline according to your manual, [first merge SVs from multiple...