SynetBuild-X.sh: line 132: detect_collinear_tandem_arrays: command not found

[alexvasilikop]

Hi,

Thanks for developing such useful tools,

I am trying to build the synteny network like below but I get this output warning see below. What might be the reason? $bash SynetBuild-X.sh 6 3 50 20

.. cCAJNOQ010077972.1.html dcCAJNOQ010078021.1.html dcCAJNOQ010078108.1.html dcCAJNOQ010078245.1.html Done! [57.500 seconds elapsed] duplication modes! Reading BLAST file and pre-processing Generating BLAST list 94597 matches imported (41496 discarded) 89489 pairwise comparisons 13 alignments generated Type of dup Code Number Singleton 0 8187 Dispersed 1 37686 Proximal 2 157 Tandem 3 677 WGD or segmental 4 156 Now we detect collinear tandem arrays. SynetBuild-X.sh: line 132: detect_collinear_tandem_arrays: command not found 610 alignments generated Type of dup Code Number Singleton 0 5090 Dispersed 1 13960 Proximal 2 5247 Tandem 3 2213 WGD or segmental 4 20078 Now we detect collinear tandem arrays. SynetBuild-X.sh: line 132: detect_collinear_tandem_arrays: command not found

..

Thanks