vcf2kinship support bgen input or not?

[Shicheng-Guo]

Hi Xiaowei,

vcf2kinship support bgen format as input or not?

The following parameters are available.  Ones with "[]" are in effect:

Available Options
            Input/Output: --inVcf [], --out []
     Chromsome X Analysis --xHemi, --xLabel [], --xRegion []
Options:
               Algorithm: --ped [], --ibs, --bn, --pca, --storeGenotype
        Specify Genotype: --dosage []
           People Filter: --peopleIncludeID [], --peopleIncludeFile []
                          --peopleExcludeID [], --peopleExcludeFile []
            Range Filter: --rangeList [], --rangeFile []
             Site Filter: --minMAF [], --maxMiss [], --minSiteQual [], --anno []
         Genotype Filter: --minGQ [], --minGD []
          Other Function: --update-id [], --thread [], --help

Effective Options

[INFO]  Program version: 20170307
[INFO]  Analysis started at: Fri Oct 30 22:36:37 2020
[ERROR] Please provide input file using: --inVcf or --ped

Thanks.

Shicheng