Unbalanced of chromosomes number and differential kmers number among subgenomes

[xingjianfeng100]

Hi~, I have got a whole new set of problems now:

there is abnormally few subgenome-specific kmers in one of subgenomes, and the numbers of assigned chromosomes among subgenomes are abnormally unbalanced. I have also tried -k ( 8,13,15,17,22,27,33,37,45,50), -q (10,200,600,1000), -f(1.5,2), but failed to deal with this problem. Have you any suggestions about that?