Right side command shortcuts stop working at random

[renews]

I launch all my apps with right cmd + something. But from time to time the right side command starts behaving as a left side one with conflicts with a lot of apps and I guess because of that the shortcuts don't work.

Here are some of mine

1. CMD+1
2. CMD+2
3. CMD+3
4. CMD+4
5. CMD+t
6. CMD+l
7. CMD+u
8. CMD+m
9. CMD+c
10. CMD+z

this is the only reason I used keyboard cowboy =} is there something that changed? Do I need to do something now for this to work again? Being using this kind of keybinds for half a year without issues until last week or so.