vcflib
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zeeev
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
Hi Zev, I'm trying to run pFST using your GPAT++ tool. It mentions using a comma separated list of inidividuals corresponding to the VCF file. I have more than 6000...
Hi. It is so good for me to use your code like GPAT. Recently, I am calculating the XP-EHH for a crop population. I have got the XP-EHH scores for...
Hi! Could you simply explain how you calculate XP-EHH and iHS without genetic distance? Thank you in advance!
I've separated your code from vcflib to make a 'stand-beside' version. https://github.com/travc/GPAT It works with the current ekg/vcflib, the directory to which is just specified at the top of the...
Hey, sorry that I keep breaking your software. When I put the output from pFst into the smoother, I get binary output mixed in with the proper output.
