Issue in make smartie-sv

[AishaYousaf]

Hi,

when I run 'cd ./smartie-sv-master/ && make', it prompts an error message like this:

make[1]: Entering directory /p200/chenhua_group/AISHA/Software/smartie-sv-master/src/blasr' make[1]: *** No targets specified and no makefile found. Stop. make[1]: Leaving directory /p200/chenhua_group/AISHA/Software/smartie-sv-master/src/blasr' make: *** [bin/blasr] Error 2

How can I fix this? Am I missing on something?

Best,

[zeeev]

Hi,

Have you tried a recursive clone?

--Zev

On Thu, Mar 28, 2019 at 8:34 PM AISHA [email protected] wrote:

Hi,

when I run 'cd ./smartie-sv-master/ && make', it prompts an error message like this:

make[1]: Entering directory /p200/chenhua_group/AISHA/Software/smartie-sv-master/src/blasr' make[1]: *** No targets specified and no makefile found. Stop. make[1]: Leaving directory /p200/chenhua_group/AISHA/Software/smartie-sv-master/src/blasr' make: *** [bin/blasr] Error 2

How can I fix this? Am I missing on something?

Best,

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[AishaYousaf]

Yeah. I first tried recursive clone which didn't work. So, I simply downloaded smartie, unzipped it and tried to make it. Are there any prerequisites to download along with smartie like blasr or htslib etc.?

Thanks!

[awaisfarooq724]

Hi,

when I run 'cd ./smartie-sv-master/ && make', it prompts an error message like this:

make[1]: Entering directory /p200/chenhua_group/AISHA/Software/smartie-sv-master/src/blasr' make[1]: *** No targets specified and no makefile found. Stop. make[1]: Leaving directory /p200/chenhua_group/AISHA/Software/smartie-sv-master/src/blasr' make: *** [bin/blasr] Error 2

How can I fix this? Am I missing on something?

Best,

hi did you find any solution to it?