zarr-python

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[v3] Generalized NDArray support

6

Recent discussions at the Refactor meeting have indicated indicated that adding generalized array support to the v3 roadmap would be useful. @akshaysubr - can I ask you to take this...

jhamman

### Zarr version v2.17.2 ### Numcodecs version v0.12.1 (not relevant?) ### Python Version 3.12 ### Operating System Mac (not relevant?) ### Installation pip in virtual environment ### Description Not sure...

miccoli

In v3, [`store.get`](https://github.com/zarr-developers/zarr-python/blob/096c900a76d08eb6bde86f5583eda697781710c8/src/zarr/abc/store.py#L8) can return `None`. For example, `MemoryStore.get` handles `KeyError` by returning `None`. However, that's the only exception handled this way, so basically `None` means `KeyError` for `MemoryStore`, which...

d-v-b

7 tests fail

6

### Zarr version 2.17.2 ### Numcodecs version Numcodecs ### Python Version 3.9 ### Operating System FreeBSD 14 ### Installation port ### Description ``` ========================================================================================= FAILURES ========================================================================================= _____________________________________________________________________________ TestNestedFSStore.test_hierarchy _____________________________________________________________________________ [gw2]...

yurivict

fix: add mypy to test dependencies

11

mypy was not in our dev dependencies. this PR adds it. expect CI to fail as mypy actually does something, instead of silently erroring out. closes #1788 TODO: * [...

d-v-b

Move fixtures to `tests`

3

Move static fixtures from `fixture` to `tests/fixture`, and alter the corresponding tests to look for fixtures in the new location. These tests contained code for regenerating these fixtures if they...

d-v-b

deprecate(stores): add deprecation warnings to stores that we plan to remove in v3

1

This adds a simple deprecation warning to the following stores: - [x] DBMStore - [x] LMDBStore - [x] SQLiteStore - [x] MongoDBStore - [x] RedisStore - [x] ABSStore - [x]...

jhamman

Modify getsize to return total size, not just the top level

6

Fixes #253 TODO: * [X] Changes documented in docs/release.rst * [ ] GitHub Actions have all passed * [ ] Test coverage is 100% (Codecov passes)

benjeffery

I thought I'd open an issue to track the path to adding 100% typing to the v3 branch. The mypy docs have a good [guide to gradually adding typing to...

dstansby

Bump redis from 5.0.3 to 5.0.4

2

Bumps [redis](https://github.com/redis/redis-py) from 5.0.3 to 5.0.4. Release notes Sourced from redis's releases. 5.0.4 Changes 🐛 Bug Fixes Make it possible to customize SSL ciphers [(#3212)](redis/redis-py#3212) Commits e71119d Make it possible...

dependabot[bot]