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About kekule

Open wlgcqh opened this issue 1 year ago • 1 comments

def get_smiles(mol): 
    return Chem.MolToSmiles(mol, kekuleSmiles=True)  
smiles = Chem.MolFragmentToSmiles(mol, atoms, kekuleSmiles=True)  

Why does reading smiles require kekule format? Is it possible not to use kekule format?

wlgcqh avatar Dec 07 '23 09:12 wlgcqh

Hi, Thanks for your interest in our work! By transforming molecules into kekule format, it becomes easier to extract motifs.

Bests,

zaixizhang avatar Feb 28 '24 19:02 zaixizhang