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                                            Lijia Yu

error in evaluating the argument 'subject' in selecting a method for function 'findOverlaps': 'seqnames' cannot contain NAs

Sure, the data frame is ``` CHROM seg seg_start seg_end cnv_state chr1 seg1 1 820000 bdel chr1 seg2 820001 1067000 neu chr1 seg3 1067001 1688000 loh chr1 seg4 1688001 1695000...

error in evaluating the argument 'subject' in selecting a method for function 'findOverlaps': 'seqnames' cannot contain NAs

Hi @teng-gao , This is only a small portion of my entire file. The dataset is in-house patient data, which I cannot expose to the public. Do you need the...

Numbat fails with 10X Visium Sample Data - Normal Human Prostate

Hi, I think you can regenerate the BAM index to see if it works