Yasset Perez-Riverol
Yasset Perez-Riverol
@AnthonyOfSeattle I have a lot of files that the extra modifications are all Unimod modifications. I would like to use your API to compute large-scale the Ascore for a lot...
The current msp and other spectral library formats only capture the metadata around each entry in the library (cluster, consensus spectra, peptides, small molecules), but not the way the spectral...
### Describe the question or discussion Reference to publication needed for Scout when it get accepted.
``` Command output: /usr/local/lib/python3.12/site-packages/sdrf_pipelines/sdrf/sdrf_schema.py:355: FutureWarning: DataFrame.applymap has been deprecated. Use DataFrame.map instead. validation_results = panda_sdrf.applymap(validate_string) /usr/local/lib/python3.12/site-packages/sdrf_pipelines/sdrf/sdrf_schema.py:355: FutureWarning: DataFrame.applymap has been deprecated. Use DataFrame.map instead. validation_results = panda_sdrf.applymap(validate_string) Multiple columns found...
This release will be a major release including multiple features and bug fixes. Issues: - [ ] #155 - [ ] #154 - [x] #153 - [ ] #152 -...
In this example, we have the same file repated, the SDRF validatior should fails because not multiplexing is in place. https://github.com/bigbio/quantms/issues/328
When a file has an empty cell, would be great that the validator give the name of the column + the row index + the source name.
Here, Im trying to introduce a model for cross-linking experiments. Feedback needed. @diogobor can you give feedback here. The proposal is the following: ### Cross-linking experiments MS-based cross-linking experiments are...
thermorawfileparser=1.4.5 quantms-utils=0.0.12 ## PR checklist - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...