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Merging replicates

Open pna059 opened this issue 2 years ago • 14 comments

Hi, I plan using your tool to analyze HiChIP data (followed by the FithHiChIP tool). At what step and how is it possible to merge replicates (which have been checked for reproducibility by HiCRep)? I would do it after removing duplicates, but am not sure if I can simply merge .ValidPair files. Thanks, Pavla

pna059 avatar Nov 21 '22 12:11 pna059